Basic information
Locus name	AT3G10300
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Signal transduction
Effect for Senescence	unclear
Gene Description	calcium-binding EF hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: EF-HAND 1 (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-Hand type (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calcium-binding EF hand family protein (TAIR:AT5G04170.1); Has 33677 Blast hits to 18283 proteins in 837 species: Archae - 0; Bacteria - 2815; Metazoa - 19689; Fungi - 3942; Plants - 3921; Viruses - 273; Other Eukaryotes - 3037 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function calcium ion binding
Sequence	AT3G10300.1 | Genomic | mRNA | CDS | Protein AT3G10300.2 | Genomic | mRNA | CDS | Protein AT3G10300.3 | Genomic | mRNA | CDS | Protein AT3G10300.4 | Genomic | mRNA | CDS | Protein AT3G10300.5 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_127426	Accession Taxon NP_001030668 Arabidopsis thaliana NP_180317 Arabidopsis thaliana NP_187641 ( AT3G10300 ) Arabidopsis thaliana NP_196037 Arabidopsis thaliana NP_850997 Arabidopsis thaliana NP_850998 Arabidopsis thaliana 190610 Chlamydomonas reinhardtii ACO61530 Micromonas sp. RCC299 NP_001062491 Oryza sativa Japonica Group NP_001065711 Oryza sativa Japonica Group NP_001066106 Oryza sativa Japonica Group estExt_fgenesh1_pg.C_Chr_06.00010330 Ostreococcus tauri e_gw1.87.113.1 Physcomitrella patens subsp. patens fgenesh1_pg.scaffold_74000090 Physcomitrella patens subsp. patens gw1.144.64.1 Physcomitrella patens subsp. patens gw1.29.125.1 Physcomitrella patens subsp. patens 27687.m000067 Ricinus communis 30055.m001566 Ricinus communis 30055.m001580 Ricinus communis XP_002958399 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR10183 3.8E-68 89 221 No hit NA SUPERFAMILY SSF47473 7.6E-8 153 213 No hit NA ProSiteProfiles PS50222 10.5 164 199 IPR002048 EF-hand domain ProSitePatterns PS00018 NA 177 189 IPR018247 EF-Hand 1, calcium-binding site
Subcellular Localization
Localization	cytosol
Evidence	SUBAcon
Pubmed ID	23180787