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| Locus name | AT3G29000 |
| Organism | Arabidopsis thaliana | | Taxonomic identifier | [NCBI] | | Function category | Signal transduction | | Effect for Senescence | unclear | | Gene Description | calcium-binding EF hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: EF-HAND 1 (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), S100/CaBP-9k-type, calcium binding (InterPro:IPR001751), EF-Hand type (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calcium-binding EF hand family protein (TAIR:AT5G39670.1); Has 10843 Blast hits to 7320 proteins in 950 species: Archae - 0; Bacteria - 573; Metazoa - 4336; Fungi - 1923; Plants - 1633; Viruses - 68; Other Eukaryotes - 2310 (source: NCBI BLink). | | Evidence | Genomic evidence:microarray data [Ref 1] | | References | 1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-WollastonHigh-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.Plant Cell 2011 Mar;23(3):873-94 | | Gene Ontology | | | Sequence | AT3G29000.1 | Genomic | mRNA | CDS | Protein
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miRNA Interaction  | |
| | Details | | target: AT3G29000.1
miRNA: ath-miR414
miRNA: ath-miR414
mfe: -34.4 kcal/mol
p-value: 0.000048
position: 206
target 5' A U U 3'
UGAUGAUGAUGAUGA GAUGA
ACUGCUACUACUACU CUACU
miRNA 3' U 5'
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| Ortholog Group | |
| | Ortholog Groups: OG5_177852 | |
| Cross Link | |
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