Basic information
Locus name	AT5G42380
Alias	CML37
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	CALMODULIN LIKE 37 (CML37); FUNCTIONS IN: calcium ion binding; INVOLVED IN: response to ozone; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: EF-HAND 1 (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-Hand type (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin-related protein, putative (TAIR:AT1G76640.1); Has 13184 Blast hits to 10239 proteins in 1127 species: Archae - 0; Bacteria - 39; Metazoa - 6469; Fungi - 2027; Plants - 2539; Viruses - 2; Other Eukaryotes - 2108 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function calcium ion binding
Sequence	AT5G42380.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_150218	Accession Taxon NP_001077834 Arabidopsis thaliana NP_177790 Arabidopsis thaliana NP_177791 Arabidopsis thaliana NP_199053 ( AT5G42380 ) Arabidopsis thaliana NP_001045436 Oryza sativa Japonica Group NP_001065531 Oryza sativa Japonica Group NP_001065929 Oryza sativa Japonica Group 30147.m014527 Ricinus communis 30170.m013729 Ricinus communis 30190.m010955 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR10891 1.0E-113 1 185 No hit NA ProSiteProfiles PS50222 13.4 45 80 IPR002048 EF-hand domain SUPERFAMILY SSF47473 9.2E-36 47 184 No hit NA SMART SM00054 0.0 49 77 IPR002048 EF-hand domain Pfam PF13499 7.0E-13 50 110 IPR011992 EF-hand-like domain ProSitePatterns PS00018 NA 58 70 IPR018247 EF-Hand 1, calcium-binding site ProSiteProfiles PS50222 13.7 81 116 IPR002048 EF-hand domain SMART SM00054 0.0 85 113 IPR002048 EF-hand domain ProSitePatterns PS00018 NA 94 106 IPR018247 EF-Hand 1, calcium-binding site ProSiteProfiles PS50222 6.5 119 154 IPR002048 EF-hand domain Pfam PF13833 3.7E-12 138 184 No hit NA ProSiteProfiles PS50222 12.1 155 185 IPR002048 EF-hand domain SMART SM00054 6.5 159 185 IPR002048 EF-hand domain ProSitePatterns PS00018 NA 168 180 IPR018247 EF-Hand 1, calcium-binding site
Subcellular Localization
Localization	cytosol,nucleus
Evidence	SUBAcon
Pubmed ID	23180787