Basic information
Locus name	AT4G28880
Alias	CKL3
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	Casein Kinase I-like 3 (ckl3); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, core (InterPro:IPR000719), Serine/threonine protein kinase-related (InterPro:IPR017442), Protein kinase-like (InterPro:IPR011009), Serine/threonine protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: ckl4 (Casein Kinase I-like 4); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase (TAIR:AT4G28860.1); Has 47686 Blast hits to 47386 proteins in 1403 species: Archae - 19; Bacteria - 6033; Metazoa - 20862; Fungi - 4890; Plants - 5655; Viruses - 307; Other Eukaryotes - 9920 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process protein phosphorylation molecular function ATP binding protein kinase activity protein serine/threonine kinase activity
Sequence	AT4G28880.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_164310	Accession Taxon NP_001078465 Arabidopsis thaliana NP_194615 Arabidopsis thaliana NP_194617 ( AT4G28880 ) Arabidopsis thaliana NP_001042496 Oryza sativa Japonica Group NP_001046556 Oryza sativa Japonica Group 29912.m005474 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR11909 1.5E-213 1 412 No hit NA SUPERFAMILY SSF56112 2.2E-85 4 290 IPR011009 Protein kinase-like domain Pfam PF00069 6.2E-37 9 265 IPR000719 Protein kinase, catalytic domain ProSiteProfiles PS50011 28.9 9 277 IPR000719 Protein kinase, catalytic domain SMART SM00220 8.1E-16 9 277 IPR002290 Serine/threonine- / dual specificity protein kinase, catalytic domain ProSitePatterns PS00107 NA 15 38 IPR017441 Protein kinase, ATP binding site ProSitePatterns PS00108 NA 124 136 IPR008271 Serine/threonine-protein kinase, active site
Subcellular Localization
Localization	cytosol
Evidence	SUBAcon
Pubmed ID	23180787