Basic information
Locus name	AT3G56240
Alias	CCH
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	COPPER CHAPERONE (CCH); FUNCTIONS IN: copper chaperone activity; INVOLVED IN: in 6 processes; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: ATX1 (ARABIDOPSIS HOMOLOG OF ANTI-OXIDANT 1); metal ion binding (TAIR:AT1G66240.1); Has 1264 Blast hits to 1164 proteins in 239 species: Archae - 8; Bacteria - 230; Metazoa - 149; Fungi - 122; Plants - 698; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process metal ion transport molecular function metal ion binding
Sequence	AT3G56240.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_130576	Accession Taxon NP_001118849 Arabidopsis thaliana NP_001154453 Arabidopsis thaliana NP_191183 ( AT3G56240 ) Arabidopsis thaliana NP_564870 Arabidopsis thaliana 163414 Chlamydomonas reinhardtii ACO66509 Micromonas sp. RCC299 NP_001047018 Oryza sativa Japonica Group NP_001061234 Oryza sativa Japonica Group estExt_gwp_gw1.C_1060024 Physcomitrella patens subsp. patens 28037.m000046 Ricinus communis XP_002954752 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR22814 2.1E-31 1 94 No hit NA SUPERFAMILY SSF55008 1.0E-17 2 68 IPR006121 Heavy metal-associated domain, HMA ProSiteProfiles PS50846 15.1 3 66 IPR006121 Heavy metal-associated domain, HMA Pfam PF00403 9.9E-15 6 63 IPR006121 Heavy metal-associated domain, HMA
Subcellular Localization
Localization	cytosol
Evidence	SUBAcon
Pubmed ID	23180787