Basic information
Locus name	AT5G57815
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Redox regulation
Effect for Senescence	unclear
Gene Description	cytochrome c oxidase subunit 6b, putative; FUNCTIONS IN: cytochrome-c oxidase activity; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit VIb (InterPro:IPR003213); BEST Arabidopsis thaliana protein match is: cytochrome c oxidase subunit 6b, putative (TAIR:AT4G28060.1); Has 426 Blast hits to 426 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 243; Fungi - 77; Plants - 83; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	cellular component mitochondrion molecular function cytochrome-c oxidase activity
Sequence	AT5G57815.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_128087	Accession Taxon NP_173661 Arabidopsis thaliana NP_194535 Arabidopsis thaliana NP_568867 ( AT5G57815 ) Arabidopsis thaliana CMR404C Cyanidioschyzon merolae strain 10D 195712 Chlamydomonas reinhardtii NP_001048358 Oryza sativa Japonica Group NP_001050275 Oryza sativa Japonica Group NP_001053212 Oryza sativa Japonica Group NP_001060309 Oryza sativa Japonica Group e_gw1.17.00.291.1 Ostreococcus tauri e_gw1.387.68.1 Physcomitrella patens subsp. patens gw1.60.215.1 Physcomitrella patens subsp. patens 29628.m000776 Ricinus communis 29783.m000313 Ricinus communis 29908.m006070 Ricinus communis e_gw1.1.869.1 Thalassiosira pseudonana CCMP1335 XP_002947475 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PIRSF PIRSF000278 5.9E-53 1 78 IPR003213 Cytochrome c oxidase, subunit VIb PANTHER PTHR11387 2.8E-53 2 78 No hit NA SUPERFAMILY SSF47694 6.8E-33 5 77 IPR003213 Cytochrome c oxidase, subunit VIb Pfam PF02297 1.5E-24 15 74 IPR003213 Cytochrome c oxidase, subunit VIb