Basic information
Locus name	AT4G10040
Alias	CYTC-2
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Redox regulation
Effect for Senescence	unclear
Gene Description	cytochrome c-2 (CYTC-2); FUNCTIONS IN: electron carrier activity, iron ion binding, heme binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c, class IA/ IB (InterPro:IPR002327), Cytochrome c, class I (InterPro:IPR003088), Cytochrome c, monohaem (InterPro:IPR009056); BEST Arabidopsis thaliana protein match is: CYTC-1 (CYTOCHROME C-1); electron carrier/ heme binding / iron ion binding (TAIR:AT1G22840.1); Has 3366 Blast hits to 3344 proteins in 553 species: Archae - 0; Bacteria - 1036; Metazoa - 542; Fungi - 196; Plants - 114; Viruses - 0; Other Eukaryotes - 1478 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function electron carrier activity heme binding iron ion binding
Sequence	AT4G10040.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_127365	Accession Taxon NP_173697 Arabidopsis thaliana NP_192742 ( AT4G10040 ) Arabidopsis thaliana CMJ212C Cyanidioschyzon merolae strain 10D 176233 Chlamydomonas reinhardtii ACO66132 Micromonas sp. RCC299 NP_001055578 Oryza sativa Japonica Group gw1.04.00.529.1 Ostreococcus tauri e_gw1.92.35.1 Physcomitrella patens subsp. patens estExt_Genewise1.C_1090034 Physcomitrella patens subsp. patens estExt_fgenesh1_pg.C_120061 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_970137 Physcomitrella patens subsp. patens 29685.m000480 Ricinus communis 30128.m008826 Ricinus communis estExt_gwp_gw1.C_chr_80115 Thalassiosira pseudonana CCMP1335
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR11961 1.1E-68 7 111 IPR002327 Cytochrome c, class IA/ IB SUPERFAMILY SSF46626 1.8E-35 9 108 IPR009056 Cytochrome c domain ProSiteProfiles PS51007 15.6 10 111 IPR009056 Cytochrome c domain Pfam PF00034 8.3E-13 13 109 IPR003088 Cytochrome c, class I PRINTS PR00604 2.2E-36 22 29 IPR002327 Cytochrome c, class IA/ IB PRINTS PR00604 2.2E-36 35 50 IPR002327 Cytochrome c, class IA/ IB PRINTS PR00604 2.2E-36 51 61 IPR002327 Cytochrome c, class IA/ IB PRINTS PR00604 2.2E-36 65 81 IPR002327 Cytochrome c, class IA/ IB PRINTS PR00604 2.2E-36 84 94 IPR002327 Cytochrome c, class IA/ IB PRINTS PR00604 2.2E-36 101 109 IPR002327 Cytochrome c, class IA/ IB
Subcellular Localization
Localization	mitochondrion
Evidence	SUBAcon
Pubmed ID	23180787