Basic information
Locus name	AT5G58782
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putative; FUNCTIONS IN: dehydrodolichyl diphosphate synthase activity; INVOLVED IN: dolichol biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, sepal, pedicel; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Di-trans-poly-cis-decaprenylcistransferase-like, conserved site (InterPro:IPR018520), Di-trans-poly-cis-decaprenylcistransferase-like (InterPro:IPR001441); BEST Arabidopsis thaliana protein match is: dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putative (TAIR:AT5G58780.1); Has 6348 Blast hits to 6317 proteins in 1543 species: Archae - 181; Bacteria - 2803; Metazoa - 153; Fungi - 167; Plants - 123; Viruses - 0; Other Eukaryotes - 2921 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function transferase activity, transferring alkyl or aryl (other than methyl) groups
Pathway	KEGG map00900 (EC 2.5.1.31) MetaCyc PWY-5785
Sequence	AT5G58782.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_126777	Accession Taxon NP_179921 Arabidopsis thaliana NP_200685 Arabidopsis thaliana NP_200858 Arabidopsis thaliana NP_200859 Arabidopsis thaliana NP_565420 Arabidopsis thaliana NP_565551 Arabidopsis thaliana NP_568882 Arabidopsis thaliana NP_568883 ( AT5G58782 ) Arabidopsis thaliana NP_568884 Arabidopsis thaliana CMB126C Cyanidioschyzon merolae strain 10D CMR474C Cyanidioschyzon merolae strain 10D 112385 Chlamydomonas reinhardtii 121674 Chlamydomonas reinhardtii ACO67719 Micromonas sp. RCC299 ACO67861 Micromonas sp. RCC299 NP_001044851 Oryza sativa Japonica Group NP_001056920 Oryza sativa Japonica Group NP_001060237 Oryza sativa Japonica Group gw1.12.00.295.1 Ostreococcus tauri gw1.16.00.146.1 Ostreococcus tauri e_gw1.34.174.1 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_1470009 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_70086 Physcomitrella patens subsp. patens 28565.m000328 Ricinus communis 28565.m000330 Ricinus communis 28565.m000331 Ricinus communis 29681.m001337 Ricinus communis 29830.m001441 Ricinus communis 34670.m000028 Ricinus communis e_gw1.3.565.1 Thalassiosira pseudonana CCMP1335 e_gw1.7.279.1 Thalassiosira pseudonana CCMP1335 XP_002946140 Volvox carteri f. nagariensis XP_002947579 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR10291 5.1E-117 4 289 IPR001441 Decaprenyl diphosphate synthase-like SUPERFAMILY SSF64005 8.1E-79 53 281 IPR001441 Decaprenyl diphosphate synthase-like Hamap MF_01139 36.2 57 287 IPR001441 Decaprenyl diphosphate synthase-like TIGRFAM TIGR00055 1.2E-77 57 286 IPR001441 Decaprenyl diphosphate synthase-like Pfam PF01255 4.9E-78 64 286 IPR001441 Decaprenyl diphosphate synthase-like ProSitePatterns PS01066 NA 232 249 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site
Subcellular Localization
Localization	endoplasmic reticulum
Evidence	SUBAcon
Pubmed ID	23180787