Basic information
Locus name	AT4G00550
Alias	DGD2
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Lipid/Carbohydrate metabolism
Effect for Senescence	unclear
Gene Description	DGD2; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, UDP-galactosyltransferase activity, digalactosyldiacylglycerol synthase activity; INVOLVED IN: cellular response to phosphate starvation, cellular response to magnesium starvation, galactolipid biosynthetic process, glycolipid biosynthetic process, cellular response to nitrogen starvation; LOCATED IN: chloroplast outer membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: DGD1 (DIGALACTOSYL DIACYLGLYCEROL DEFICIENT 1); UDP-galactosyltransferase/ galactolipid galactosyltransferase/ transferase, transferring glycosyl groups (TAIR:AT3G11670.1); Has 236 Blast hits to 236 proteins in 69 species: Archae - 11; Bacteria - 94; Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process biosynthetic process
Sequence	AT4G00550.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_177918	Accession Taxon NP_191964 ( AT4G00550 ) Arabidopsis thaliana NP_001049371 Oryza sativa Japonica Group NP_001049672 Oryza sativa Japonica Group 30174.m008983 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR12526 1.5E-213 1 392 No hit NA SUPERFAMILY SSF53756 3.7E-20 9 54 No hit NA SUPERFAMILY SSF53756 3.7E-20 90 390 No hit NA Pfam PF00534 1.5E-11 223 334 IPR001296 Glycosyl transferase, family 1 Coils Coil NA 245 266 No hit NA
Subcellular Localization
Localization 1 Localization chloroplast Evidence Localization with GFP-fusion protein (GFP:cDNA) Pubmed ID 10737809
Localization 2 Localization plastid Evidence SUBAcon Pubmed ID 23180787