Basic information
Locus name	AT4G22770
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	DNA-binding family protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding, conserved site (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: DNA-binding family protein (TAIR:AT4G12080.1); Has 554 Blast hits to 548 proteins in 75 species: Archae - 0; Bacteria - 59; Metazoa - 26; Fungi - 29; Plants - 423; Viruses - 8; Other Eukaryotes - 9 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Sequence	AT4G22770.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_139537	Accession Taxon NP_191931 Arabidopsis thaliana NP_192945 Arabidopsis thaliana NP_194008 ( AT4G22770 ) Arabidopsis thaliana NP_001045744 Oryza sativa Japonica Group NP_001060866 Oryza sativa Japonica Group NP_001062218 Oryza sativa Japonica Group estExt_fgenesh1_pg.C_110043 Physcomitrella patens subsp. patens estExt_fgenesh1_pg.C_2230073 Physcomitrella patens subsp. patens estExt_fgenesh1_pg.C_350186 Physcomitrella patens subsp. patens estExt_fgenesh1_pg.C_4690002 Physcomitrella patens subsp. patens fgenesh1_pg.scaffold_190000028 Physcomitrella patens subsp. patens fgenesh1_pg.scaffold_204000074 Physcomitrella patens subsp. patens gw1.157.72.1 Physcomitrella patens subsp. patens 30170.m013803 Ricinus communis 30190.m011046 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR31500 7.3E-101 29 331 No hit NA SUPERFAMILY SSF117856 9.4E-32 149 277 No hit NA Pfam PF03479 1.2E-41 150 265 IPR005175 Domain of unknown function DUF296