Basic information
Locus name	AT5G05750
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Protein degradation/modification
Effect for Senescence	unclear
Gene Description	DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Tetratricopeptide region (InterPro:IPR013026), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT3G57340.2); Has 16636 Blast hits to 16631 proteins in 1960 species: Archae - 118; Bacteria - 5128; Metazoa - 3676; Fungi - 1518; Plants - 1246; Viruses - 21; Other Eukaryotes - 4929 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function protein binding
Sequence	AT5G05750.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_127638	Accession Taxon NP_191293 Arabidopsis thaliana NP_196194 ( AT5G05750 ) Arabidopsis thaliana NP_199717 Arabidopsis thaliana NP_850714 Arabidopsis thaliana CMT623C Cyanidioschyzon merolae strain 10D 175485 Chlamydomonas reinhardtii ACO65763 Micromonas sp. RCC299 ACO67980 Micromonas sp. RCC299 NP_001043324 Oryza sativa Japonica Group NP_001055322 Oryza sativa Japonica Group gw1.01.00.701.1 Ostreococcus tauri estExt_gwp_gw1.C_20331 Physcomitrella patens subsp. patens 28320.m001115 Ricinus communis 29726.m004056 Ricinus communis e_gw1.3.784.1 Thalassiosira pseudonana CCMP1335 XP_002956147 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description ProSiteProfiles PS50293 8.5 1 41 IPR013026 Tetratricopeptide repeat-containing domain PANTHER PTHR24077 7.3E-42 2 266 No hit NA ProSiteProfiles PS50005 8.1 8 41 IPR019734 Tetratricopeptide repeat SUPERFAMILY SSF46565 5.6E-26 109 216 IPR001623 DnaJ domain SMART SM00271 1.1E-23 113 170 IPR001623 DnaJ domain Pfam PF00226 4.1E-23 114 175 IPR001623 DnaJ domain ProSiteProfiles PS50076 19.2 114 178 IPR001623 DnaJ domain PRINTS PR00625 4.5E-14 116 134 IPR001623 DnaJ domain PRINTS PR00625 4.5E-14 134 149 IPR001623 DnaJ domain PRINTS PR00625 4.5E-14 150 170 IPR001623 DnaJ domain ProSitePatterns PS00636 NA 155 174 IPR018253 DnaJ domain, conserved site