Basic information   
Locus name AT4G13830
AliasJ20
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryProtein degradation/modification
Effect for Senescenceunclear
Gene DescriptionDNAJ-LIKE 20 (J20); FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT4G39960.1); Has 15787 Blast hits to 15786 proteins in 1904 species: Archae - 116; Bacteria - 5334; Metazoa - 3149; Fungi - 1415; Plants - 1097; Viruses - 8; Other Eukaryotes - 4668 (source: NCBI BLink).
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston
High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.
Plant Cell 2011 Mar;23(3):873-94

SequenceAT4G13830.1 | Genomic | mRNA | CDS | Protein
AT4G13830.2 | Genomic | mRNA | CDS | Protein
Ortholog Group      
Ortholog Groups: OG5_164576
AccessionTaxon
NP_193119 ( AT4G13830 ) Arabidopsis thaliana
NP_849376Arabidopsis thaliana
NP_001041744Oryza sativa Japonica Group
e_gw1.160.75.1Physcomitrella patens subsp. patens
estExt_fgenesh1_pg.C_1450082Physcomitrella patens subsp. patens
29904.m002887Ricinus communis
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR250406.7E-7132155No hitNA
SUPERFAMILYSSF465657.6E-2561149IPR001623DnaJ domain
SMARTSM002713.0E-2265125IPR001623DnaJ domain
ProSiteProfilesPS5007619.766133IPR001623DnaJ domain
PfamPF002262.0E-2167130IPR001623DnaJ domain
PRINTSPR006253.4E-176886IPR001623DnaJ domain
PRINTSPR006253.4E-1786101IPR001623DnaJ domain
PRINTSPR006253.4E-17105125IPR001623DnaJ domain
ProSitePatternsPS00636NA110129IPR018253DnaJ domain, conserved site
PRINTSPR006253.4E-17145155IPR001623DnaJ domain
Subcellular Localization   
Localizationcytosol
EvidenceSUBAcon
Pubmed ID23180787