Basic information
Locus name	AT4G19040
Alias	EDR2
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	EDR2; FUNCTIONS IN: lipid binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769), Pleckstrin homology-type (InterPro:IPR011993), Lipid-binding START (InterPro:IPR002913), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing protein (TAIR:AT5G45560.1); Has 289 Blast hits to 286 proteins in 44 species: Archae - 0; Bacteria - 2; Metazoa - 57; Fungi - 0; Plants - 184; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function phospholipid binding protein binding
Sequence	AT4G19040.1 | Genomic | mRNA | CDS | Protein AT4G19040.2 | Genomic | mRNA | CDS | Protein AT4G19040.3 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_150238	Accession Taxon NP_001119010 ( AT4G19040 ) Arabidopsis thaliana NP_193639 Arabidopsis thaliana NP_199369 Arabidopsis thaliana NP_001045600 Oryza sativa Japonica Group NP_001064750 Oryza sativa Japonica Group estExt_fgenesh1_pg.C_4160012 Physcomitrella patens subsp. patens fgenesh1_pg.scaffold_253000022 Physcomitrella patens subsp. patens 29827.m002570 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR12136 4.6E-195 1 402 No hit NA SUPERFAMILY SSF50729 3.1E-13 1 114 No hit NA ProSiteProfiles PS50003 9.7 3 110 IPR001849 Pleckstrin homology domain SMART SM00233 1.8E-11 4 112 IPR001849 Pleckstrin homology domain SMART SM00234 4.5E-50 180 389 IPR002913 START domain SUPERFAMILY SSF55961 6.3E-42 185 361 No hit NA ProSiteProfiles PS50848 25.2 200 369 IPR002913 START domain Pfam PF01852 5.0E-21 225 361 IPR002913 START domain Pfam PF07059 4.7E-71 504 708 IPR009769 Domain of unknown function DUF1336
Subcellular Localization
Localization 1 Localization cytosol,mitochondrion Evidence SUBAcon Pubmed ID 23180787
Localization 2 Localization plasma membrane Evidence SUBAcon Pubmed ID 23180787