Basic information
Locus name	AT3G54650
Alias	FBL17
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	FBL17; FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: embryonic development, generative cell mitosis, seed development, pollen development, ubiquitin-dependent protein catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin-like F-box (InterPro:IPR001810); Has 1265 Blast hits to 887 proteins in 101 species: Archae - 0; Bacteria - 21; Metazoa - 649; Fungi - 49; Plants - 355; Viruses - 0; Other Eukaryotes - 191 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function protein binding
Sequence	AT3G54650.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_178312	Accession Taxon NP_567005 ( AT3G54650 ) Arabidopsis thaliana NP_001050712 Oryza sativa Japonica Group NP_001067207 Oryza sativa Japonica Group 29883.m001995 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR23125 2.8E-212 27 537 No hit NA SUPERFAMILY SSF81383 1.8E-6 140 171 IPR001810 F-box domain, cyclin-like Pfam PF00646 2.1E-5 142 168 IPR001810 F-box domain, cyclin-like SUPERFAMILY SSF52047 1.3E-19 187 421 No hit NA SMART SM00367 520.0 252 277 IPR006553 Leucine-rich repeat, cysteine-containing subtype SMART SM00367 570.0 294 320 IPR006553 Leucine-rich repeat, cysteine-containing subtype SMART SM00367 14.0 351 376 IPR006553 Leucine-rich repeat, cysteine-containing subtype SMART SM00367 140.0 377 401 IPR006553 Leucine-rich repeat, cysteine-containing subtype SUPERFAMILY SSF52047 1.8E-6 465 533 No hit NA SMART SM00367 38.0 492 517 IPR006553 Leucine-rich repeat, cysteine-containing subtype