Basic information
Locus name	AT3G48880
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	F-box family protein-related;
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function protein binding
Sequence	AT3G48880.1 | Genomic | mRNA | CDS | Protein AT3G48880.2 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT3G48880.2  miRNA: ath-miR5641 miRNA: ath-miR5641 mfe: -27.4 kcal/mol  p-value: 0.000694  position: 4  target 5' A     A        A      U  3'             AAUUC UAUCAUCU CUUCCA                 UUAAG AUAGUAGA GAAGGU      miRNA  3' A              A         5'
Ortholog Group
Ortholog Groups: OG5_177872	Accession Taxon NP_190457 Arabidopsis thaliana NP_850671 ( AT3G48880 ) Arabidopsis thaliana NP_001064994 Oryza sativa Japonica Group 30147.m013759 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR23125 1.6E-150 1 259 No hit NA SUPERFAMILY SSF81383 2.8E-10 8 66 IPR001810 F-box domain, cyclin-like Pfam PF12937 1.6E-9 19 59 No hit NA SUPERFAMILY SSF52047 7.1E-11 99 236 No hit NA