Basic information
Locus name	AT3G46000
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others:Metabolism
Effect for Senescence	Unclear
Gene Description	Actin depolymerization factor
Evidence	Molecular evidence: SSH and Northern [Ref 1]
References	1: Gepstein S, Sabehi G, Carp MJ, Hajouj T, Nesher MF, Yariv I, Dor C, Bassani M Large-scale identification of leaf senescence-associated genes. Plant J. 2003 Dec;36(5):629-42
Gene Ontology	biological process actin filament depolymerization cellular component actin cytoskeleton molecular function actin binding
Sequence	AT3G46000.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_127118	Accession Taxon NP_001078247 Arabidopsis thaliana NP_171680 Arabidopsis thaliana NP_190187 Arabidopsis thaliana NP_194289 Arabidopsis thaliana NP_566882 ( AT3G46000 ) Arabidopsis thaliana NP_567182 Arabidopsis thaliana NP_568769 Arabidopsis thaliana NP_568915 Arabidopsis thaliana NP_568916 Arabidopsis thaliana NP_851227 Arabidopsis thaliana NP_851228 Arabidopsis thaliana CMN147C Cyanidioschyzon merolae strain 10D 183437 Chlamydomonas reinhardtii ACO61281 Micromonas sp. RCC299 NP_001047657 Oryza sativa Japonica Group NP_001051720 Oryza sativa Japonica Group NP_001051721 Oryza sativa Japonica Group NP_001053519 Oryza sativa Japonica Group NP_001054456 Oryza sativa Japonica Group NP_001059648 Oryza sativa Japonica Group e_gw1.04.00.507.1 Ostreococcus tauri estExt_Genewise1.C_2170058 Physcomitrella patens subsp. patens 29154.m000209 Ricinus communis 29585.m000599 Ricinus communis 29895.m000310 Ricinus communis 30174.m009006 Ricinus communis 30190.m011193 Ricinus communis fgenesh1_pg.C_chr_4000780 Thalassiosira pseudonana CCMP1335 XP_002957436 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR11913 1.0E-79 2 135 IPR017904 ADF/Cofilin/Destrin SUPERFAMILY SSF55753 3.3E-44 3 135 No hit NA ProSiteProfiles PS51263 34.6 5 137 IPR002108 Actin-binding, cofilin/tropomyosin type Pfam PF00241 2.0E-42 12 136 IPR002108 Actin-binding, cofilin/tropomyosin type SMART SM00102 1.5E-58 12 137 IPR002108 Actin-binding, cofilin/tropomyosin type
Subcellular Localization
Localization 1 Localization cytoplasm and nucleus Evidence Localization with GFP-ORF fusion protein (GFP:cDNA) Pubmed ID 15610358
Localization 2 Localization cytosol Evidence SUBAcon Pubmed ID 23180787