Leaf Senescence DataBase

Basic information

Locus name

AT3G14960

Organism

Arabidopsis thaliana

Taxonomic identifier

[NCBI]

Function category

Others

Effect for Senescence

unclear

Gene Description

galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: galactosyltransferase family protein (TAIR:AT1G53290.1); Has 932 Blast hits to 929 proteins in 77 species: Archae - 0; Bacteria - 2; Metazoa - 607; Fungi - 2; Plants - 303; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).

Evidence

Genomic evidence:microarray data [Ref 1]

References

1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston
High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.
Plant Cell 2011 Mar;23(3):873-94

Gene Ontology

biological process	protein glycosylation
cellular component	membrane
molecular function	galactosyltransferase activity

Pathway

KEGG

map00051 (EC 2.4.1.-)
map00510 (EC 2.4.1.-)
map00512 (EC 2.4.1.-)
map00513 (EC 2.4.1.-)
map00514 (EC 2.4.1.-)
map00522 (EC 2.4.1.-)
map00524 (EC 2.4.1.-)
map00533 (EC 2.4.1.-)
map00540 (EC 2.4.1.-)
map00550 (EC 2.4.1.-)
map00561 (EC 2.4.1.-)
map00563 (EC 2.4.1.-)
map00600 (EC 2.4.1.-)
map00601 (EC 2.4.1.-)
map00603 (EC 2.4.1.-)
map00604 (EC 2.4.1.-)
map00906 (EC 2.4.1.-)
map00908 (EC 2.4.1.-)
map00941 (EC 2.4.1.-)
map00942 (EC 2.4.1.-)
map00944 (EC 2.4.1.-)
map00945 (EC 2.4.1.-)
map00965 (EC 2.4.1.-)

Sequence

AT3G14960.1 | Genomic | mRNA | CDS | Protein

Ortholog Group

Ortholog Groups: OG5_147194

Accession	Taxon
NP_175736	Arabidopsis thaliana
NP_180179	Arabidopsis thaliana
NP_188114 ( AT3G14960 )	Arabidopsis thaliana
NP_001056857	Oryza sativa Japonica Group
estExt_Genewise1.C_650042	Physcomitrella patens subsp. patens
gw1.34.149.1	Physcomitrella patens subsp. patens
29794.m003321	Ricinus communis
30150.m000486	Ricinus communis
estExt_fgenesh1_pg.C_chr_200024	Thalassiosira pseudonana CCMP1335
XP_002952341	Volvox carteri f. nagariensis

Cross Link

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PANTHER	PTHR11214	9.3E-257	1	327	IPR002659	Glycosyl transferase, family 31
Pfam	PF01762	2.6E-47	99	292	IPR002659	Glycosyl transferase, family 31

Subcellular Localization

Localization

extracellular

Evidence

SUBAcon

Pubmed ID

23180787