Basic information
Locus name	AT4G01120
Alias	GBF2
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Transcription regulation
Effect for Senescence	unclear
Gene Description	G-BOX BINDING FACTOR 2 (GBF2); FUNCTIONS IN: transcription factor activity, sequence-specific DNA binding, DNA binding; INVOLVED IN: response to blue light; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), G-box binding, MFMR (InterPro:IPR012900), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: GBF3 (G-BOX BINDING FACTOR 3); sequence-specific DNA binding / transcription factor (TAIR:AT2G46270.2); Has 1572 Blast hits to 1543 proteins in 180 species: Archae - 0; Bacteria - 18; Metazoa - 493; Fungi - 95; Plants - 840; Viruses - 1; Other Eukaryotes - 125 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process regulation of transcription, DNA-dependent transcription, DNA-dependent cellular component nucleus molecular function DNA binding sequence-specific DNA binding transcription factor activity sequence-specific DNA binding
Sequence	AT4G01120.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_177168	Accession Taxon NP_192021 ( AT4G01120 ) Arabidopsis thaliana
Cross Link
Database Entry ID E-value Start End InterPro ID Description Pfam PF07777 7.3E-67 1 182 IPR012900 G-box binding, MFMR PANTHER PTHR22952 6.8E-219 29 314 No hit NA Pfam PF00170 3.8E-20 247 310 IPR004827 Basic-leucine zipper domain SMART SM00338 4.0E-20 247 311 IPR004827 Basic-leucine zipper domain ProSiteProfiles PS50217 12.5 249 312 IPR004827 Basic-leucine zipper domain SUPERFAMILY SSF57959 2.6E-10 250 306 No hit NA ProSitePatterns PS00036 NA 254 269 IPR004827 Basic-leucine zipper domain Coils Coil NA 281 316 No hit NA
Subcellular Localization
Localization 1 Localization nucleus Evidence Localization with GFP-fusion protein (GFP:cDNA) Pubmed ID 10737809
Localization 2 Localization nucleus Evidence SUBAcon Pubmed ID 23180787