Basic information
Locus name	AT4G33860
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Lipid/Carbohydrate metabolism
Effect for Senescence	unclear
Gene Description	glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Galactose-binding like (InterPro:IPR008979), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 10 protein (TAIR:AT4G33840.1); Has 1329 Blast hits to 1324 proteins in 269 species: Archae - 0; Bacteria - 658; Metazoa - 27; Fungi - 276; Plants - 163; Viruses - 0; Other Eukaryotes - 205 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process carbohydrate metabolic process molecular function hydrolase activity, acting on glycosyl bonds hydrolase activity, hydrolyzing O-glycosyl compounds
Sequence	AT4G33860.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_155952	Accession Taxon NP_195109 Arabidopsis thaliana NP_195110 Arabidopsis thaliana NP_195112 ( AT4G33860 ) Arabidopsis thaliana NP_001049300 Oryza sativa Japonica Group NP_001064414 Oryza sativa Japonica Group NP_001064415 Oryza sativa Japonica Group 29812.m000195 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR31490 1.7E-235 1 571 No hit NA SUPERFAMILY SSF49785 1.0E-14 43 176 IPR008979 Galactose-binding domain-like Pfam PF02018 1.2E-7 46 161 IPR003305 Carbohydrate-binding, CenC-like SUPERFAMILY SSF51445 3.3E-87 210 513 IPR017853 Glycoside hydrolase, superfamily Pfam PF00331 4.8E-43 225 480 IPR001000 Glycoside hydrolase, family 10 SMART SM00633 2.6E-9 258 510 IPR001000 Glycoside hydrolase, family 10