Basic information
Locus name	AT3G62560
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Signal transduction
Effect for Senescence	unclear
Gene Description	GTP-binding protein, putative; FUNCTIONS IN: GTP binding; INVOLVED IN: intracellular protein transport; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), GTP-binding protein SAR1 (InterPro:IPR006687), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ATSAR2 (ARABIDOPSIS THALIANA SECRETION-ASSOCIATED RAS SUPER FAMILY 2); GTP binding (TAIR:AT4G02080.1); Has 5231 Blast hits to 5228 proteins in 291 species: Archae - 2; Bacteria - 39; Metazoa - 2741; Fungi - 852; Plants - 681; Viruses - 0; Other Eukaryotes - 916 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function GTP binding
Sequence	AT3G62560.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_127331	Accession Taxon NP_176029 Arabidopsis thaliana NP_191815 ( AT3G62560 ) Arabidopsis thaliana NP_192117 Arabidopsis thaliana CMT196C Cyanidioschyzon merolae strain 10D 82091 Chlamydomonas reinhardtii ACO66922 Micromonas sp. RCC299 NP_001042615 Oryza sativa Japonica Group NP_001042942 Oryza sativa Japonica Group NP_001057193 Oryza sativa Japonica Group NP_001067016 Oryza sativa Japonica Group estExt_fgenesh1_pm.C_Chr_14.00010048 Ostreococcus tauri estExt_Genewise1.C_70238 Physcomitrella patens subsp. patens estExt_fgenesh1_pm.C_440003 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_1830015 Physcomitrella patens subsp. patens fgenesh1_kg.scaffold_10000014 Physcomitrella patens subsp. patens 29889.m003270 Ricinus communis 30076.m004672 Ricinus communis 30128.m008897 Ricinus communis e_gw1.19b.29.1 Thalassiosira pseudonana CCMP1335 estExt_gwp_gw1.C_chr_20302 Thalassiosira pseudonana CCMP1335 XP_002949071 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR11711 5.0E-126 1 192 No hit NA SMART SM00177 3.4E-18 3 191 IPR024156 Small GTPase superfamily, ARF type SMART SM00178 6.4E-132 4 192 IPR006687 Small GTPase superfamily, SAR1-type Pfam PF00025 2.2E-66 8 192 IPR006689 Small GTPase superfamily, ARF/SAR type ProSiteProfiles PS51422 26.6 16 192 IPR006687 Small GTPase superfamily, SAR1-type SUPERFAMILY SSF52540 5.4E-44 17 192 IPR027417 P-loop containing nucleoside triphosphate hydrolase TIGRFAM TIGR00231 4.4E-16 19 135 IPR005225 Small GTP-binding protein domain PRINTS PR00328 7.7E-75 22 45 IPR006689 Small GTPase superfamily, ARF/SAR type PRINTS PR00328 7.7E-75 50 74 IPR006689 Small GTPase superfamily, ARF/SAR type PRINTS PR00328 7.7E-75 77 102 IPR006689 Small GTPase superfamily, ARF/SAR type PRINTS PR00328 7.7E-75 122 143 IPR006689 Small GTPase superfamily, ARF/SAR type PRINTS PR00328 7.7E-75 166 190 IPR006689 Small GTPase superfamily, ARF/SAR type