Basic information
Locus name	AT5G02600
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	heavy-metal-associated domain-containing protein; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: heavy-metal-associated domain-containing protein (TAIR:AT2G37390.1); Has 1331 Blast hits to 991 proteins in 133 species: Archae - 0; Bacteria - 32; Metazoa - 114; Fungi - 70; Plants - 772; Viruses - 53; Other Eukaryotes - 290 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process metal ion transport molecular function metal ion binding
Sequence	AT5G02600.1 | Genomic | mRNA | CDS | Protein AT5G02600.2 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_213225	Accession Taxon NP_568105 ( AT5G02600 ) Arabidopsis thaliana NP_974723 Arabidopsis thaliana
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR22814 3.0E-35 250 313 No hit NA ProSiteProfiles PS50846 11.8 250 307 IPR006121 Heavy metal-associated domain, HMA SUPERFAMILY SSF55008 1.7E-14 250 307 IPR006121 Heavy metal-associated domain, HMA Pfam PF00403 1.6E-16 254 308 IPR006121 Heavy metal-associated domain, HMA
Subcellular Localization
Localization	nucleus
Evidence	SUBAcon
Pubmed ID	23180787