|
|
|
|
| Locus name | AT5G23405 |
| Alias | HMG1/2 | | Organism | Arabidopsis thaliana | | Taxonomic identifier | [NCBI] | | Function category | Others | | Effect for Senescence | unclear | | Gene Description | high mobility group (HMG1/2) family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910); BEST Arabidopsis thaliana protein match is: HMGB6; transcription factor (TAIR:AT5G23420.1); Has 569 Blast hits to 533 proteins in 111 species: Archae - 0; Bacteria - 10; Metazoa - 244; Fungi - 37; Plants - 158; Viruses - 7; Other Eukaryotes - 113 (source: NCBI BLink). | | Evidence | Genomic evidence:microarray data [Ref 1] | | References | 1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-WollastonHigh-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.Plant Cell 2011 Mar;23(3):873-94 | | Sequence | AT5G23405.1 | Genomic | mRNA | CDS | Protein
AT5G23405.2 | Genomic | mRNA | CDS | Protein
|
Ortholog Group  | |
| | Ortholog Groups: OG5_213240 | |
| Cross Link | |
| |
|
