Basic information
Locus name	AT3G47350
Alias	ATHSD2
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	hydroxysteroid dehydrogenase 2 (AtHSD2); FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: NAD(P)-binding (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: AtHSD3 (hydroxysteroid dehydrogenase 3); binding / catalytic/ oxidoreductase (TAIR:AT3G47360.1).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process metabolic process molecular function oxidoreductase activity
Sequence	AT3G47350.1 | Genomic | mRNA | CDS | Protein AT3G47350.2 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_132866	Accession Taxon NP_001154667 ( AT3G47350 ) Arabidopsis thaliana NP_190319 Arabidopsis thaliana NP_190320 Arabidopsis thaliana NP_199871 Arabidopsis thaliana NP_680417 Arabidopsis thaliana NP_001052642 Oryza sativa Japonica Group NP_001066740 Oryza sativa Japonica Group estExt_gwp_gw1.C_940053 Physcomitrella patens subsp. patens 30147.m014464 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR24322 2.4E-167 1 308 No hit NA PIRSF PIRSF000126 2.2E-25 13 307 IPR002198 Short-chain dehydrogenase/reductase SDR SUPERFAMILY SSF51735 4.9E-60 42 299 No hit NA Pfam PF00106 1.4E-30 47 213 IPR002198 Short-chain dehydrogenase/reductase SDR PRINTS PR00081 3.4E-25 48 65 IPR002347 Glucose/ribitol dehydrogenase PRINTS PR00080 1.3E-9 123 134 IPR002198 Short-chain dehydrogenase/reductase SDR PRINTS PR00081 3.4E-25 123 134 IPR002347 Glucose/ribitol dehydrogenase PRINTS PR00081 3.4E-25 170 186 IPR002347 Glucose/ribitol dehydrogenase PRINTS PR00080 1.3E-9 176 184 IPR002198 Short-chain dehydrogenase/reductase SDR PRINTS PR00080 1.3E-9 196 215 IPR002198 Short-chain dehydrogenase/reductase SDR PRINTS PR00081 3.4E-25 196 215 IPR002347 Glucose/ribitol dehydrogenase PRINTS PR00081 3.4E-25 216 233 IPR002347 Glucose/ribitol dehydrogenase