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Locus name | AT3G55430 |
Organism | Arabidopsis thaliana |
Taxonomic identifier | [NCBI] |
Function category | Others:Cell wall |
Effect for Senescence | Unclear |
Gene Description | Beta-1,3 glucanase like protein. Upregulated in senescent leaves. |
Evidence | Molecular evidence: SSH and Northern [Ref 1] |
References | 1: Gepstein S, Sabehi G, Carp MJ, Hajouj T, Nesher MF, Yariv I, Dor C, Bassani MLarge-scale identification of leaf senescence-associated genes.Plant J. 2003 Dec;36(5):629-42 |
Gene Ontology | |
Pathway | |
Sequence | AT3G55430.1 | Genomic | mRNA | CDS | Protein
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miRNA Interaction | |
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Details | | target: AT3G55430.1 miRNA: ath-miR833-5p miRNA: ath-miR833-5p mfe: -26.8 kcal/mol p-value: 0.011315
position: 712 target 5' C C G 3' CU GACCG GUGCA CAAGCA GA CUGGC CAUGU GUUUGU miRNA 3' U U U U 5'
target: AT3G55430.1 miRNA: ath-miR837-5p miRNA: ath-miR837-5p mfe: -25.8 kcal/mol p-value: 0.016603
position: 1244 target 5' C C G A 3' GAAACGGACAAGG G UGG CUUUGCUUGUUCU U ACU miRNA 3' A U G A 5'
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Ortholog Group | |
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Ortholog Groups: OG5_164272 | |
Cross Link | |
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Localization | extracellular |
Evidence | SUBAcon |
Pubmed ID | 23180787 |