Basic information
Locus name	AT4G00120
Alias	IND
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Transcription regulation
Effect for Senescence	unclear
Gene Description	INDEHISCENT (IND); FUNCTIONS IN: transcription factor activity, DNA binding; INVOLVED IN: polar nucleus fusion, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Basic helix-loop-helix dimerisation region bHLH (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: HEC3 (HECATE 3); DNA binding / transcription factor (TAIR:AT5G09750.1); Has 1277 Blast hits to 1277 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1277; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function protein dimerization activity
Sequence	AT4G00120.1 | Genomic | mRNA | CDS | Protein
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR12565 2.7E-24 60 192 No hit NA ProSiteProfiles PS50888 14.2 118 167 IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain SMART SM00353 1.1E-11 124 173 IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain SUPERFAMILY SSF47459 3.8E-13 124 177 IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain Pfam PF00010 3.2E-6 126 167 IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
Subcellular Localization
Localization	nucleus
Evidence	SUBAcon
Pubmed ID	23180787