Basic information
Locus name	AT5G20900
Alias	JAZ12
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	JASMONATE-ZIM-DOMAIN PROTEIN 12 (JAZ12); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: JAZ11 (JASMONATE-ZIM-DOMAIN PROTEIN 11) (TAIR:AT3G43440.1); Has 247 Blast hits to 242 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 245; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function protein binding
Sequence	AT5G20900.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_190611	Accession Taxon NP_197590 ( AT5G20900 ) Arabidopsis thaliana NP_001054103 Oryza sativa Japonica Group 29739.m003659 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description ProSiteProfiles PS51320 15.9 51 86 IPR010399 Tify SMART SM00979 1.1E-16 51 86 IPR010399 Tify Pfam PF06200 9.4E-16 53 86 IPR010399 Tify Pfam PF09425 1.4E-14 139 164 IPR018467 CO/COL/TOC1, conserved site
Subcellular Localization
Localization	cytosol
Evidence	SUBAcon
Pubmed ID	23180787