Basic information
Locus name	AT5G63190
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	MA3 domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891); BEST Arabidopsis thaliana protein match is: MA3 domain-containing protein (TAIR:AT4G24800.2); Has 1496 Blast hits to 591 proteins in 80 species: Archae - 0; Bacteria - 0; Metazoa - 1077; Fungi - 6; Plants - 322; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function binding
Sequence	AT5G63190.1 | Genomic | mRNA | CDS | Protein AT5G63190.2 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_129731	Accession Taxon NP_001031708 Arabidopsis thaliana NP_173687 Arabidopsis thaliana NP_190411 Arabidopsis thaliana NP_567708 Arabidopsis thaliana NP_568968 ( AT5G63190 ) Arabidopsis thaliana NP_851255 Arabidopsis thaliana 192147 Chlamydomonas reinhardtii ACO63800 Micromonas sp. RCC299 NP_001049417 Oryza sativa Japonica Group NP_001053119 Oryza sativa Japonica Group NP_001060879 Oryza sativa Japonica Group 0500010244 Ostreococcus tauri e_gw1.214.71.1 Physcomitrella patens subsp. patens e_gw1.72.35.1 Physcomitrella patens subsp. patens fgenesh1_pm.scaffold_15000024 Physcomitrella patens subsp. patens 28644.m000917 Ricinus communis 30147.m013821 Ricinus communis thaps1_ua_kg.chr_24000018 Thalassiosira pseudonana CCMP1335 XP_002956063 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR12626 5.9E-262 5 702 No hit NA SUPERFAMILY SSF48371 4.2E-41 121 280 IPR016024 Armadillo-type fold ProSiteProfiles PS51366 25.1 122 243 IPR003891 Initiation factor eIF-4 gamma, MA3 Pfam PF02847 9.1E-33 123 234 IPR003891 Initiation factor eIF-4 gamma, MA3 SMART SM00544 3.1E-42 123 234 IPR003891 Initiation factor eIF-4 gamma, MA3 SUPERFAMILY SSF48371 3.8E-36 283 401 IPR016024 Armadillo-type fold ProSiteProfiles PS51366 24.3 286 407 IPR003891 Initiation factor eIF-4 gamma, MA3 SMART SM00544 2.9E-36 287 398 IPR003891 Initiation factor eIF-4 gamma, MA3 Pfam PF02847 3.2E-32 288 398 IPR003891 Initiation factor eIF-4 gamma, MA3 SUPERFAMILY SSF48371 1.2E-37 418 577 IPR016024 Armadillo-type fold ProSiteProfiles PS51366 22.2 420 541 IPR003891 Initiation factor eIF-4 gamma, MA3 SMART SM00544 6.7E-36 421 532 IPR003891 Initiation factor eIF-4 gamma, MA3 Pfam PF02847 4.7E-29 422 531 IPR003891 Initiation factor eIF-4 gamma, MA3 SUPERFAMILY SSF48371 8.3E-32 581 696 IPR016024 Armadillo-type fold ProSiteProfiles PS51366 22.7 583 702 IPR003891 Initiation factor eIF-4 gamma, MA3 SMART SM00544 1.6E-32 584 693 IPR003891 Initiation factor eIF-4 gamma, MA3 Pfam PF02847 2.0E-31 585 692 IPR003891 Initiation factor eIF-4 gamma, MA3