Basic information
Locus name	AT5G35330
Alias	MBD02
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	METHYL-CPG-BINDING DOMAIN PROTEIN 02 (MBD02); FUNCTIONS IN: DNA demethylase activity, DNA binding;
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	cellular component nucleus molecular function DNA binding zinc ion binding
Sequence	AT5G35330.1 | Genomic | mRNA | CDS | Protein AT5G35330.2 | Genomic | mRNA | CDS | Protein AT5G35330.3 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_170715	Accession Taxon NP_198383 Arabidopsis thaliana NP_974850 ( AT5G35330 ) Arabidopsis thaliana NP_001063550 Oryza sativa Japonica Group e_gw1.273.27.1 Physcomitrella patens subsp. patens 29843.m000288 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR15547 5.0E-223 1 272 No hit NA ProSiteProfiles PS51050 12.7 53 112 IPR011124 Zinc finger, CW-type Pfam PF07496 1.1E-14 59 110 IPR011124 Zinc finger, CW-type SUPERFAMILY SSF54171 3.9E-29 97 214 IPR016177 DNA-binding, integrase-type ProSiteProfiles PS50982 17.4 118 192 IPR001739 Methyl-CpG DNA binding SMART SM00391 2.1E-7 120 199 IPR001739 Methyl-CpG DNA binding Pfam PF01429 2.7E-12 128 188 IPR001739 Methyl-CpG DNA binding
Subcellular Localization
Localization	nucleus
Evidence	SUBAcon
Pubmed ID	23180787