Basic information
Locus name	AT1G14400
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Protein degradation/modification:Ubiquitin
Effect for Senescence	Unclear
Gene Description	Ubiquitin carrier protein. Upregulated in senescent leaves.
Evidence	Molecular evidence: SSH and Northern [Ref 1]
References	1: Gepstein S, Sabehi G, Carp MJ, Hajouj T, Nesher MF, Yariv I, Dor C, Bassani M Large-scale identification of leaf senescence-associated genes. Plant J. 2003 Dec;36(5):629-42
Gene Ontology	molecular function acid-amino acid ligase activity
Pathway
Sequence	AT1G14400.1 | Genomic | mRNA | CDS | Protein AT1G14400.2 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_127153	Accession Taxon NP_563951 Arabidopsis thaliana NP_565289 Arabidopsis thaliana NP_568956 Arabidopsis thaliana NP_973825 ( AT1G14400 ) Arabidopsis thaliana CMK253C Cyanidioschyzon merolae strain 10D 132836 Chlamydomonas reinhardtii NP_113132 Guillardia theta ACO66643 Micromonas sp. RCC299 NP_001051522 Oryza sativa Japonica Group NP_001054819 Oryza sativa Japonica Group NP_001058973 Oryza sativa Japonica Group estExt_gwp_GeneWisePlus.C_Chr_14.00010161 Ostreococcus tauri estExt_Genewise1.C_910072 Physcomitrella patens subsp. patens estExt_fgenesh1_pg.C_910042 Physcomitrella patens subsp. patens 29736.m002026 Ricinus communis estExt_fgenesh1_pm.C_chr_120019 Thalassiosira pseudonana CCMP1335 XP_002956171 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR24067 1.5E-110 1 149 No hit NA SUPERFAMILY SSF54495 1.2E-62 1 150 IPR016135 Ubiquitin-conjugating enzyme/RWD-like ProSiteProfiles PS50127 47.2 7 139 IPR000608 Ubiquitin-conjugating enzyme, E2 SMART SM00212 7.7E-67 7 150 No hit NA Pfam PF00179 2.8E-52 8 144 IPR000608 Ubiquitin-conjugating enzyme, E2 ProSitePatterns PS00183 NA 77 92 IPR023313 Ubiquitin-conjugating enzyme, active site