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Locus name | AT3G14590 |
Alias | NTMC2T6.2 |
Organism | Arabidopsis thaliana |
Taxonomic identifier | [NCBI] |
Function category | Others |
Effect for Senescence | unclear |
Gene Description | NTMC2T6.2; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding region, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); |
Evidence | Genomic evidence:microarray data [Ref 1] |
References | 1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-WollastonHigh-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.Plant Cell 2011 Mar;23(3):873-94 |
Gene Ontology | |
Sequence | AT3G14590.1 | Genomic | mRNA | CDS | Protein AT3G14590.2 | Genomic | mRNA | CDS | Protein AT3G14590.3 | Genomic | mRNA | CDS | Protein
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miRNA Interaction | |
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Details | | target: AT3G14590.1 miRNA: ath-miR1886.3 miRNA: ath-miR1886.3 mfe: -22.7 kcal/mol p-value: 0.011264
position: 1902 target 5' G C G G 3' AG GAGAUGAAGUCU UUGGUU UC UUCUACUUUAGA AAUUAA miRNA 3' A 5'
target: AT3G14590.2 miRNA: ath-miR1886.3 miRNA: ath-miR1886.3 mfe: -22.7 kcal/mol p-value: 0.011142
position: 1801 target 5' G C G G 3' AG GAGAUGAAGUCU UUGGUU UC UUCUACUUUAGA AAUUAA miRNA 3' A 5'
target: AT3G14590.3 miRNA: ath-miR1886.3 miRNA: ath-miR1886.3 mfe: -22.7 kcal/mol p-value: 0.010085
position: 1530 target 5' G C G G 3' AG GAGAUGAAGUCU UUGGUU UC UUCUACUUUAGA AAUUAA miRNA 3' A 5'
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Ortholog Group | |
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Ortholog Groups: OG5_156369 | |
Cross Link | |
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Localization 1 | Localization | cytosol | Evidence | SUBAcon | Pubmed ID | 23180787 |
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Localization 2 | Localization | endoplasmic reticulum | Evidence | SUBAcon | Pubmed ID | 23180787 |
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