Basic information   
Locus name AT4G21580
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryRedox regulation
Effect for Senescenceunclear
Gene Descriptionoxidoreductase, zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity, zinc ion binding; INVOLVED IN: oxidation reduction, metabolic process;
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston
High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.
Plant Cell 2011 Mar;23(3):873-94

Gene Ontology
biological process
molecular function
Pathway
KEGG
SequenceAT4G21580.1 | Genomic | mRNA | CDS | Protein
AT4G21580.2 | Genomic | mRNA | CDS | Protein
AT4G21580.3 | Genomic | mRNA | CDS | Protein
Microarray   
Sampling Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4)
Comparation Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
D/L: ratio of DARK 5d/control.
CD: Cell Death, ratio of starved cell suspension culture/control.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group      
Ortholog Groups: OG5_129009
AccessionTaxon
NP_001031691Arabidopsis thaliana
NP_001078419Arabidopsis thaliana
NP_193889 ( AT4G21580 ) Arabidopsis thaliana
CMS229CCyanidioschyzon merolae strain 10D
NP_001048442Oryza sativa Japonica Group
estExt_fgenesh2_kg.C_1280001Physcomitrella patens subsp. patens
29917.m001960Ricinus communis
e_gw1.3.404.1Thalassiosira pseudonana CCMP1335
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR116956.7E-1391324IPR002085Alcohol dehydrogenase superfamily, zinc-type
SUPERFAMILYSSF501293.0E-391140IPR011032GroES-like
TIGRFAMTIGR028245.1E-1381324IPR014189Quinone oxidoreductase PIG3
SMARTSM008292.0E-5510323IPR020843Polyketide synthase, enoylreductase
PfamPF082401.2E-92887IPR013154Alcohol dehydrogenase GroES-like
SUPERFAMILYSSF517351.2E-52111286No hitNA
PfamPF001074.1E-35151264IPR013149Alcohol dehydrogenase, C-terminal
Subcellular Localization   
Localizationcytosol
EvidenceSUBAcon
Pubmed ID23180787