Basic information   
Locus name AT5G47050
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryOthers
Effect for Senescenceunclear
Gene Descriptionprotein binding / zinc ion binding; FUNCTIONS IN: protein binding, zinc ion binding;
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston
High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.
Plant Cell 2011 Mar;23(3):873-94

Gene Ontology
molecular function
SequenceAT5G47050.1 | Genomic | mRNA | CDS | Protein
Microarray   
Sampling Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4)
Comparation Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
D/L: ratio of DARK 5d/control.
CD: Cell Death, ratio of starved cell suspension culture/control.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group      
Ortholog Groups: OG5_159840
AccessionTaxon
NP_001078402Arabidopsis thaliana
NP_193503Arabidopsis thaliana
NP_199516 ( AT5G47050 ) Arabidopsis thaliana
NP_564408Arabidopsis thaliana
NP_001047776Oryza sativa Japonica Group
NP_001065420Oryza sativa Japonica Group
29628.m000788Ricinus communis
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PIRSFPIRSF0368361.1E-1441300IPR017066S-ribonuclease binding protein, SBP1, pollen
PANTHERPTHR144932.5E-978299No hitNA
CoilsCoilNA141183No hitNA
PfamPF139201.3E-9253292No hitNA
ProSiteProfilesPS500899.4253287IPR001841Zinc finger, RING-type