Basic information   
Locus name AT4G39140
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryOthers
Effect for Senescenceunclear
Gene Descriptionprotein binding / zinc ion binding; FUNCTIONS IN: protein binding, zinc ion binding;
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston
High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.
Plant Cell 2011 Mar;23(3):873-94

Gene Ontology
molecular function
SequenceAT4G39140.1 | Genomic | mRNA | CDS | Protein
AT4G39140.2 | Genomic | mRNA | CDS | Protein
AT4G39140.3 | Genomic | mRNA | CDS | Protein
AT4G39140.4 | Genomic | mRNA | CDS | Protein
AT4G39140.5 | Genomic | mRNA | CDS | Protein
Microarray   
Sampling Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4)
Comparation Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
D/L: ratio of DARK 5d/control.
CD: Cell Death, ratio of starved cell suspension culture/control.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group      
Ortholog Groups: OG5_156357
AccessionTaxon
NP_001078514 ( AT4G39140 ) Arabidopsis thaliana
NP_195625Arabidopsis thaliana
NP_849522Arabidopsis thaliana
NP_850013Arabidopsis thaliana
NP_850014Arabidopsis thaliana
NP_974711Arabidopsis thaliana
NP_974712Arabidopsis thaliana
30131.m007080Ricinus communis
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR311502.0E-1952429No hitNA
SUPERFAMILYSSF578501.2E-6259319No hitNA
ProSiteProfilesPS5008910.2260319IPR001841Zinc finger, RING-type