Basic information
Locus name	AT5G57130
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	protein binding; FUNCTIONS IN: protein binding; INVOLVED IN: protein metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages;
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process protein metabolic process
Sequence	AT5G57130.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT5G57130.1  miRNA: ath-miR414 miRNA: ath-miR414 mfe: -35.2 kcal/mol  p-value: 0.000399  position: 1573  target 5' C              U     U  3'             GACGAUGGUGAUGA GAUGA                 CUGCUACUACUACU CUACU      miRNA  3' A              U        5'  target: AT5G57130.1  miRNA: ath-miR5658 miRNA: ath-miR5658 mfe: -26.9 kcal/mol  p-value: 0.005264  position: 531  target 5' C    A           C   A  3'             UUCA CAUCAUCAUCA CAU                 AAGU GUAGUAGUAGU GUA      miRNA  3' A    A           A      5'
Ortholog Group
Ortholog Groups: OG5_177981	Accession Taxon NP_194721 Arabidopsis thaliana NP_568849 ( AT5G57130 ) Arabidopsis thaliana NP_001052404 Oryza sativa Japonica Group 30063.m001446 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR11638 0.0 1 1002 No hit NA SUPERFAMILY SSF81923 4.9E-6 12 132 No hit NA Pfam PF02861 0.0 25 54 IPR004176 Clp, N-terminal Pfam PF02861 0.8 158 193 IPR004176 Clp, N-terminal Coils Coil NA 350 371 No hit NA