Basic information
Locus name	AT4G28550
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	signal transduction
Effect for Senescence	unclear
Gene Description	RabGAP/TBC domain-containing protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: sperm cell, flower, root;
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process regulation of Rab GTPase activity cellular component intracellular molecular function Rab GTPase activator activity
Sequence	AT4G28550.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_170250	Accession Taxon NP_001154525 Arabidopsis thaliana NP_179634 Arabidopsis thaliana NP_194584 ( AT4G28550 ) Arabidopsis thaliana NP_001048471 Oryza sativa Japonica Group 28492.m000474 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR22957 7.2E-228 6 423 No hit NA SUPERFAMILY SSF47923 1.4E-53 45 109 IPR000195 Rab-GTPase-TBC domain SMART SM00164 1.5E-28 67 338 IPR000195 Rab-GTPase-TBC domain ProSiteProfiles PS50086 37.4 70 315 IPR000195 Rab-GTPase-TBC domain Pfam PF00566 1.9E-38 144 313 IPR000195 Rab-GTPase-TBC domain SUPERFAMILY SSF47923 1.4E-53 153 275 IPR000195 Rab-GTPase-TBC domain SUPERFAMILY SSF47923 3.1E-29 253 416 IPR000195 Rab-GTPase-TBC domain