Basic information
Locus name	AT3G54770
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: root, carpel; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA recognition motif (RRM)-containing protein (TAIR:AT1G20880.1).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function nucleic acid binding
Sequence	AT3G54770.1 | Genomic | mRNA | CDS | Protein AT3G54770.2 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_176693	Accession Taxon NP_001030860 Arabidopsis thaliana NP_191037 ( AT3G54770 ) Arabidopsis thaliana NP_001049774 Oryza sativa Japonica Group 29923.m000811 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR24011 2.1E-168 1 203 No hit NA ProSiteProfiles PS50102 12.2 1 62 IPR000504 RNA recognition motif domain SMART SM00360 0.0 1 58 IPR000504 RNA recognition motif domain Pfam PF00076 1.3E-10 2 44 IPR000504 RNA recognition motif domain SUPERFAMILY SSF54928 1.3E-15 2 72 No hit NA