Basic information
Locus name	AT5G06210
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	RNA-binding protein, putative; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: GR-RBP5 (glycine-rich RNA-binding protein 5); ATP binding / RNA binding (TAIR:AT1G74230.1).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function nucleic acid binding
Sequence	AT5G06210.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_190533	Accession Taxon NP_196239 ( AT5G06210 ) Arabidopsis thaliana 111544 Chlamydomonas reinhardtii 30032.m000469 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description ProSiteProfiles PS51257 5.0 1 24 No hit NA ProSiteProfiles PS50102 20.3 34 112 IPR000504 RNA recognition motif domain SUPERFAMILY SSF54928 1.5E-31 34 128 No hit NA PANTHER PTHR24012 4.7E-32 35 118 No hit NA SMART SM00360 1.5E-26 35 108 IPR000504 RNA recognition motif domain Pfam PF00076 1.8E-22 36 105 IPR000504 RNA recognition motif domain