Basic information
Locus name	AT3G58040
Alias	SINAT2
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	SEVEN IN ABSENTIA OF ARABIDOPSIS 2 (); FUNCTIONS IN: ubiquitin-protein ligase activity, protein binding, zinc ion binding; INVOLVED IN: multicellular organismal development, protein ubiquitination, ubiquitin-dependent protein catabolic process; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages;
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process multicellular organismal development ubiquitin-dependent protein catabolic process cellular component nucleus
Pathway	KEGG map00380 (EC 6.3.2.-)
Sequence	AT3G58040.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_130260	Accession Taxon NP_181729 Arabidopsis thaliana NP_191363 ( AT3G58040 ) Arabidopsis thaliana NP_194517 Arabidopsis thaliana NP_567118 Arabidopsis thaliana NP_001042518 Oryza sativa Japonica Group NP_001045773 Oryza sativa Japonica Group NP_001046599 Oryza sativa Japonica Group NP_001054994 Oryza sativa Japonica Group estExt_Genewise1.C_1120104 Physcomitrella patens subsp. patens estExt_Genewise1.C_350083 Physcomitrella patens subsp. patens 29491.m000092 Ricinus communis 29742.m001411 Ricinus communis 29742.m001413 Ricinus communis 30024.m001712 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR10315 1.3E-128 31 307 IPR004162 Seven-in-absentia protein, sina SUPERFAMILY SSF57850 4.0E-7 51 102 No hit NA ProSiteProfiles PS50089 9.6 60 96 IPR001841 Zinc finger, RING-type Pfam PF03145 1.7E-74 102 301 IPR018121 Seven-in-absentia protein, TRAF-like domain ProSiteProfiles PS51081 14.3 113 173 IPR013010 Zinc finger, SIAH-type SUPERFAMILY SSF49599 4.1E-48 113 305 IPR008974 TRAF-like