Leaf Senescence DataBase

Basic information

Locus name

AT3G21700

Alias

SGP2

Organism

Arabidopsis thaliana

Taxonomic identifier

[NCBI]

Function category

Signal transduction

Effect for Senescence

unclear

Gene Description

SGP2; FUNCTIONS IN: GTP binding; INVOLVED IN: small GTPase mediated signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures;

Evidence

Genomic evidence:microarray data [Ref 1]

References

1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston
High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.
Plant Cell 2011 Mar;23(3):873-94

Gene Ontology

biological process	small GTPase mediated signal transduction
molecular function	GTP binding

Sequence

Ortholog Group

Ortholog Groups: OG5_190959

Accession	Taxon
NP_566690	Arabidopsis thaliana
NP_850621	Arabidopsis thaliana
NP_850622 ( AT3G21700 )	Arabidopsis thaliana

Cross Link

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PANTHER	PTHR24073	1.0E-179	1	291	No hit	NA
PIRSF	PIRSF037527	2.3E-157	1	291	IPR017231	Small GTPase superfamily, Tem1
ProSiteProfiles	PS51419	9.0	101	291	No hit	NA
PRINTS	PR00449	1.2E-8	107	128	IPR001806	Small GTPase superfamily
SMART	SM00175	5.2E-5	107	274	IPR003579	Small GTPase superfamily, Rab type
SUPERFAMILY	SSF52540	6.8E-26	107	282	IPR027417	P-loop containing nucleoside triphosphate hydrolase
Pfam	PF08477	4.6E-26	108	221	IPR013684	Mitochondrial Rho-like
PRINTS	PR00449	1.2E-8	149	171	IPR001806	Small GTPase superfamily
PRINTS	PR00449	1.2E-8	209	222	IPR001806	Small GTPase superfamily
PRINTS	PR00449	1.2E-8	249	271	IPR001806	Small GTPase superfamily

Subcellular Localization

Localization

mitochondrion

Evidence

SUBAcon

Pubmed ID

23180787