Basic information
Locus name	AT5G04220
Alias	SYTC
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	SYTC; Unregualtion during leaf senescence
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function protein binding
Sequence	AT5G04220.1 | Genomic | mRNA | CDS | Protein AT5G04220.2 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_129223	Accession Taxon NP_173436 Arabidopsis thaliana NP_565495 Arabidopsis thaliana NP_568135 Arabidopsis thaliana NP_974729 ( AT5G04220 ) Arabidopsis thaliana 154598 Chlamydomonas reinhardtii 159730 Chlamydomonas reinhardtii ACO65051 Micromonas sp. RCC299 ACO67644 Micromonas sp. RCC299 NP_001046755 Oryza sativa Japonica Group NP_001063800 Oryza sativa Japonica Group 28169.m000027 Ricinus communis 29602.m000216 Ricinus communis 30170.m014378 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR10774 2.8E-148 4 317 No hit NA SUPERFAMILY SSF49562 9.1E-34 35 172 IPR008973 C2 calcium/lipid-binding domain, CaLB SMART SM00239 5.4E-22 40 140 IPR000008 C2 calcium-dependent membrane targeting Pfam PF00168 2.9E-25 41 122 IPR000008 C2 calcium-dependent membrane targeting ProSiteProfiles PS50004 17.0 41 125 IPR018029 C2 membrane targeting protein PRINTS PR00360 8.6E-8 56 68 IPR020477 C2 domain PRINTS PR00360 8.6E-8 83 96 IPR020477 C2 domain PRINTS PR00360 8.6E-8 105 113 IPR020477 C2 domain SUPERFAMILY SSF49562 4.8E-25 198 317 IPR008973 C2 calcium/lipid-binding domain, CaLB SMART SM00239 7.4E-17 199 298 IPR000008 C2 calcium-dependent membrane targeting Pfam PF00168 1.2E-14 200 270 IPR000008 C2 calcium-dependent membrane targeting ProSiteProfiles PS50004 11.7 200 283 IPR018029 C2 membrane targeting protein