Basic information   
Locus name AT5G24590
AliasTIP
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryTranscription regulation
Effect for Senescenceunclear
Gene DescriptionTCV-INTERACTING PROTEIN (TIP); FUNCTIONS IN: transcription coactivator activity, transcription factor activity; INVOLVED IN: defense response to virus, multicellular organismal development;
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston
High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.
Plant Cell 2011 Mar;23(3):873-94

Gene Ontology
biological process
molecular function
SequenceAT5G24590.2 | Genomic | mRNA | CDS | Protein
miRNA Interaction      
Details
target: AT5G24590.2 
miRNA: ath-miR781a
miRNA: ath-miR781a
mfe: -26.7 kcal/mol 
p-value: 0.007132 

position: 547 
target 5' A        A            U  3' 
           UAGGUGUU AGAGGACUCUAG     
           AUUCAUAG UCUUUUGAGAUU     
miRNA  3'          G               5' 

target: AT5G24590.2 
miRNA: ath-miR781b
miRNA: ath-miR781b
mfe: -26.7 kcal/mol 
p-value: 0.009115 

position: 547 
target 5' A        A            U  3' 
           UAGGUGUU AGAGGACUCUAG     
           AUUCAUAG UCUUUUGAGAUU     
miRNA  3'          G               5' 
Ortholog Group      
Ortholog Groups: OG5_190295
AccessionTaxon
NP_190522Arabidopsis thaliana
NP_197847 ( AT5G24590 ) Arabidopsis thaliana
29764.m000758Ricinus communis
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR319899.2E-1211440No hitNA
SUPERFAMILYSSF1019418.4E-585164IPR003441No apical meristem (NAM) protein
PfamPF023653.5E-4813141IPR003441No apical meristem (NAM) protein
ProSiteProfilesPS5100554.713164IPR003441No apical meristem (NAM) protein
Subcellular Localization   
Localizationnucleus
EvidenceSUBAcon
Pubmed ID23180787