Basic information
Locus name	AT4G24470
Alias	TIFY1
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Transcription regulation
Effect for Senescence	unclear
Gene Description	TIFY1; FUNCTIONS IN: transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus;
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process regulation of transcription, DNA-dependent molecular function protein binding sequence-specific DNA binding transcription factor activity sequence-specific DNA binding zinc ion binding
Sequence	AT4G24470.1 | Genomic | mRNA | CDS | Protein AT4G24470.2 | Genomic | mRNA | CDS | Protein AT4G24470.3 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_212660	Accession Taxon NP_194178 ( AT4G24470 ) Arabidopsis thaliana NP_849435 Arabidopsis thaliana
Cross Link
Database Entry ID E-value Start End InterPro ID Description Pfam PF06200 1.3E-12 77 111 IPR010399 Tify ProSiteProfiles PS51320 14.3 77 112 IPR010399 Tify SMART SM00979 5.3E-14 77 112 IPR010399 Tify PANTHER PTHR10071 4.0E-31 123 266 No hit NA Pfam PF06203 2.4E-15 146 189 IPR010402 CCT domain ProSiteProfiles PS51017 12.0 146 188 IPR010402 CCT domain ProSiteProfiles PS50114 10.8 208 267 IPR000679 Zinc finger, GATA-type SMART SM00401 8.1E-18 208 261 IPR000679 Zinc finger, GATA-type SUPERFAMILY SSF57716 4.8E-13 210 270 No hit NA Pfam PF00320 1.2E-12 214 250 IPR000679 Zinc finger, GATA-type ProSitePatterns PS00344 NA 214 241 IPR000679 Zinc finger, GATA-type
Subcellular Localization
Localization 1 Localization nucleus Evidence Localization with GFP-fusion protein (GFP:cDNA) Pubmed ID 10737809
Localization 2 Localization nucleus Evidence SUBAcon Pubmed ID 23180787