Basic information
Locus name	AT5G43380
Alias	TOPP6
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Protein degradation/modification
Effect for Senescence	unclear
Gene Description	TOPP6; FUNCTIONS IN: protein serine/threonine phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: cellular_component unknown;
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function hydrolase activity
Sequence	AT5G43380.1 | Genomic | mRNA | CDS | Protein AT5G43380.2 | Genomic | mRNA | CDS | Protein AT5G43380.3 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_126821	Accession Taxon NP_001032000 Arabidopsis thaliana NP_001032103 Arabidopsis thaliana NP_176587 Arabidopsis thaliana NP_181514 Arabidopsis thaliana NP_190266 Arabidopsis thaliana NP_200724 Arabidopsis thaliana NP_567375 Arabidopsis thaliana NP_568625 Arabidopsis thaliana NP_851123 ( AT5G43380 ) Arabidopsis thaliana NP_851218 Arabidopsis thaliana CME079C Cyanidioschyzon merolae strain 10D 160030 Chlamydomonas reinhardtii NP_113268 Guillardia theta ACO64648 Micromonas sp. RCC299 NP_001048539 Oryza sativa Japonica Group NP_001049669 Oryza sativa Japonica Group NP_001056901 Oryza sativa Japonica Group estExt_gwp_GeneWisePlus.C_Chr_15.00010098 Ostreococcus tauri estExt_Genewise1.C_390047 Physcomitrella patens subsp. patens estExt_fgenesh1_pg.C_220110 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_970145 Physcomitrella patens subsp. patens fgenesh1_pg.scaffold_283000030 Physcomitrella patens subsp. patens 29680.m001683 Ricinus communis 29895.m000315 Ricinus communis 30190.m011282 Ricinus communis estExt_Genewise1.C_chr_30107 Thalassiosira pseudonana CCMP1335 estExt_gwp_gw1.C_chr_30380 Thalassiosira pseudonana CCMP1335 XP_002953868 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR11668 1.2E-211 6 304 No hit NA SUPERFAMILY SSF56300 4.1E-115 18 297 No hit NA SMART SM00156 3.4E-168 26 296 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase Pfam PF00149 2.3E-45 54 247 IPR004843 Metallophosphoesterase domain PRINTS PR00114 1.4E-94 54 81 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase PRINTS PR00114 1.4E-94 83 110 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase PRINTS PR00114 1.4E-94 116 140 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase ProSitePatterns PS00125 NA 117 122 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase PRINTS PR00114 1.4E-94 150 176 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase PRINTS PR00114 1.4E-94 179 206 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase PRINTS PR00114 1.4E-94 236 256 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase PRINTS PR00114 1.4E-94 258 274 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase