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| Locus name | AT3G28580 |
| Organism | Arabidopsis thaliana |
| Taxonomic identifier | [NCBI] |
| Function category | Redox regulation:ATPase |
| Effect for Senescence | Unclear |
| Gene Description | AAA-type ATPase. Upregulated in senescent leaves. |
| Evidence | Genomic evidence:microarray data [Ref 1] |
| References | 1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJComparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.Plant J. 2005 May;42(4):567-85 |
| Gene Ontology | |
| Sequence | AT3G28580.1 | Genomic | mRNA | CDS | Protein
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| Sampling |
Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4) |
| Comparation |
Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence. |
miRNA Interaction  | |
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| Details | | target: AT3G28580.1
miRNA: ath-miR414
miRNA: ath-miR414
mfe: -30.4 kcal/mol
p-value: 0.000548
position: 1096
target 5' A A A A 3'
GA GAUGAUGAUGAAG AUGA
CU CUACUACUACUUC UACU
miRNA 3' A G 5'
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| Ortholog Group | |
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| Ortholog Groups: OG5_147064 | |
| Cross Link | |
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| Localization | endoplasmic reticulum |
| Evidence | SUBAcon |
| Pubmed ID | 23180787 |
