Basic information
Locus name	AT5G01380
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Transcription regulation
Effect for Senescence	unclear
Gene Description	transcription factor; FUNCTIONS IN: transcription factor activity; INVOLVED IN: regulation of transcription; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function chromatin binding
Sequence	AT5G01380.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_144958	Accession Taxon NP_181360 Arabidopsis thaliana NP_195758 ( AT5G01380 ) Arabidopsis thaliana NP_001053771 Oryza sativa Japonica Group NP_001054535 Oryza sativa Japonica Group e_gw1.100.155.1 Physcomitrella patens subsp. patens e_gw1.301.32.1 Physcomitrella patens subsp. patens e_gw1.301.33.1 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_2850022 Physcomitrella patens subsp. patens fgenesh1_pm.scaffold_100000017 Physcomitrella patens subsp. patens 28308.m000066 Ricinus communis 29827.m002603 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR10032 1.4E-129 18 313 No hit NA SMART SM00717 1.5E-4 48 110 IPR001005 SANT/Myb domain Pfam PF13837 8.3E-21 50 135 No hit NA ProSiteProfiles PS50090 8.0 52 108 IPR017877 Myb-like domain Coils Coil NA 251 288 No hit NA