Basic information
Locus name	AT5G03220
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Transcription regulation
Effect for Senescence	unclear
Gene Description	transcriptional co-activator-related; FUNCTIONS IN: transcription coactivator activity; INVOLVED IN: positive regulation of transcription; LOCATED IN: nucleus;
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process regulation of transcription from RNA polymerase II promoter cellular component mediator complex molecular function RNA polymerase II transcription cofactor activity
Sequence	AT5G03220.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_129702	Accession Taxon NP_001078525 Arabidopsis thaliana NP_195942 ( AT5G03220 ) Arabidopsis thaliana NP_195970 Arabidopsis thaliana 194032 Chlamydomonas reinhardtii ACO67323 Micromonas sp. RCC299 NP_001054151 Oryza sativa Japonica Group 0200010560 Ostreococcus tauri gw1.218.51.1 Physcomitrella patens subsp. patens 27553.m000321 Ricinus communis XP_002948601 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR21428 6.4E-130 1 168 IPR009244 Mediator complex, subunit Med7 Pfam PF05983 9.7E-53 3 158 IPR009244 Mediator complex, subunit Med7 Coils Coil NA 67 88 No hit NA SUPERFAMILY SSF140718 6.0E-29 67 159 No hit NA Coils Coil NA 137 165 No hit NA