Basic information
Locus name	AT3G29270
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	ubiquitin-protein ligase; FUNCTIONS IN: ubiquitin-protein ligase activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages;
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function protein binding zinc ion binding
Sequence	AT3G29270.1 | Genomic | mRNA | CDS | Protein AT3G29270.2 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_160238	Accession Taxon NP_189573 Arabidopsis thaliana NP_974376 ( AT3G29270 ) Arabidopsis thaliana NP_001049345 Oryza sativa Japonica Group NP_001050412 Oryza sativa Japonica Group gw1.104.126.1 Physcomitrella patens subsp. patens gw1.78.69.1 Physcomitrella patens subsp. patens 29630.m000777 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR13139 3.3E-141 31 263 No hit NA SUPERFAMILY SSF57850 4.2E-10 49 112 No hit NA Pfam PF13445 8.4E-8 52 85 IPR027370 RING-type zinc-finger, LisH dimerisation motif ProSiteProfiles PS50089 10.2 54 109 IPR001841 Zinc finger, RING-type ProSitePatterns PS00518 NA 73 82 IPR017907 Zinc finger, RING-type, conserved site