Basic information
Locus name	AT2G44500
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	unknown protein
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Pathway
Sequence	AT2G44500.1 | Genomic | mRNA | CDS | Protein AT2G44500.2 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT2G44500.1  miRNA: ath-miR5640 miRNA: ath-miR5640 mfe: -29.4 kcal/mol  p-value: 0.001602  position: 284  target 5' A              A     U  3'             GAAUCUGGUUCUUU CUCUC                 CUUAGAUUAAGGAA GAGAG      miRNA  3' A                    U  5'  target: AT2G44500.2  miRNA: ath-miR5640 miRNA: ath-miR5640 mfe: -29.4 kcal/mol  p-value: 0.001716  position: 333  target 5' A              A     U  3'             GAAUCUGGUUCUUU CUCUC                 CUUAGAUUAAGGAA GAGAG      miRNA  3' A                    U  5'
Ortholog Group
Ortholog Groups: OG5_177752	Accession Taxon NP_181978 ( AT2G44500 ) Arabidopsis thaliana NP_187447 Arabidopsis thaliana NP_973688 Arabidopsis thaliana 29808.m000893 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PIRSF PIRSF009360 1.9E-277 1 565 IPR024709 O-fucosyltransferase, plant PANTHER PTHR31741 6.5E-98 180 573 No hit NA Pfam PF10250 1.5E-75 184 501 IPR019378 GDP-fucose protein O-fucosyltransferase