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| Locus name | AT5G17050 |
| Organism | Arabidopsis thaliana |
| Taxonomic identifier | [NCBI] |
| Function category | Redox regulation:flavonoid biosynthesis |
| Effect for Senescence | Unclear |
| Gene Description | UDP glucose:flavonoid 3-o-glucosyltransferase |
| Evidence | Genomic evidence:microarray data [Ref 1] |
| References | 1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJComparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.Plant J. 2005 May;42(4):567-85 |
| Gene Ontology | |
| Sequence | AT5G17050.1 | Genomic | mRNA | CDS | Protein
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| Sampling |
Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4) |
| Comparation |
Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence. |
miRNA Interaction  | |
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| Details | | target: AT5G17050.1
miRNA: ath-miR773
miRNA: ath-miR773
mfe: -24.9 kcal/mol
p-value: 0.028995
position: 427
target 5' G U A 3'
GAGACGGAGGUUGG A CGGA
CUCUGUUUUCGACC U GUUU
miRNA 3' U C 5'
target: AT5G17050.1
miRNA: ath-miR828
miRNA: ath-miR828
mfe: -24.6 kcal/mol
p-value: 0.004559
position: 336
target 5' A G G 3'
GGGAUAC UGUUUA GCGGGA
CCUUAUG GUAAAU CGUUCU
miRNA 3' A A U 5'
target: AT5G17050.1
miRNA: ath-miR835-5p
miRNA: ath-miR835-5p
mfe: -21.1 kcal/mol
p-value: 0.026059
position: 1260
target 5' C U G U 3'
GGUGGAGG UGUGUG GAGA
CUAUUUCU GUAUAC UUCU
miRNA 3' U G U 5'
target: AT5G17050.1
miRNA: ath-miR835-5p
miRNA: ath-miR835-5p
mfe: -22.8 kcal/mol
p-value: 0.011925
position: 604
target 5' A U G A 3'
GUAGG GAGCGUAUG AGGAG
UAUUU CUUGUAUAC UUCUU
miRNA 3' C G 5'
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| Ortholog Group | |
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| Ortholog Groups: OG5_159702 | |
| Cross Link | |
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