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| Locus name | AT5G54060 |
| Organism | Arabidopsis thaliana |
| Taxonomic identifier | [NCBI] |
| Function category | Redox regulation:flavonoid biosynthesis |
| Effect for Senescence | Unclear |
| Gene Description | Glycosyltransferase family protein.Upregulated in senescent leaves. |
| Evidence | Genomic evidence:microarray data [Ref 1] |
| References | 1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJComparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.Plant J. 2005 May;42(4):567-85 |
| Gene Ontology | |
| Sequence | AT5G54060.1 | Genomic | mRNA | CDS | Protein
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| Sampling |
Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4) |
| Comparation |
Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence. |
miRNA Interaction  | |
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| Details | | target: AT5G54060.1
miRNA: ath-miR776
miRNA: ath-miR776
mfe: -21.9 kcal/mol
p-value: 0.049472
position: 555
target 5' A G G C 3'
AAUGUCAG GGAGGA UUAG
UUGUAGUU UCUUCU AAUC
miRNA 3' A G U 5'
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| Ortholog Group | |
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| Ortholog Groups: OG5_178123 | | Accession | Taxon | | NP_200217 ( AT5G54060 ) | Arabidopsis thaliana |
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| Cross Link | |
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